Standard Guide for Cell Culture Analysis with SIMS

SIGNIFICANCE AND USE
5.1 The presence of cell growth medium complicates a direct analysis of cells with SIMS. Attempts to wash out the nutrient medium results in the exposure of cells to unphysiological reagents that may also alter their chemical composition. This obstacle is overcome by using a sandwich freeze-fracture method (1). This cryogenic method has provided a unique way of sampling individual cells in their native state for SIMS analysis.  
5.2 The procedure described here has been successfully used for imaging Na+ and K+ ion transport  (3), calcium alterations in stimulated cells (4,5), and localization of therapeutic drugs and isotopically labeled molecules in single cells (6). The frozen freeze-dried cells prepared according to this method have been checked for SIMS matrix effects  (7). Ion image quantification has also been achieved in this sample type (8).  
5.3 The procedure described here is amenable to a wide variety of cell cultures and provides a way for studying the response of individual cells for chemical alterations in the state of health and disease and localization of isotopically-labeled molecules and theraputic drugs in cell culture models.
SCOPE
1.1 This guide provides the Secondary Ion Mass Spectrometry (SIMS) analyst with a cryogenic method for analyzing individual tissue culture cells growing in vitro. This guide is suitable for frozen-hydrated and frozen-freeze-dried sample types. Included are procedures for correlating optical, laser scanning confocal and secondary electron microscopies to complement SIMS analysis.  
1.2 This guide is not suitable for cell cultures that do not attach to the substrate.  
1.3 This guide is not suitable for any plastic embedded cell culture specimens.  
1.4 This standard does not purport to address all of the safety concerns, if any, associated with its use. It is the responsibility of the user of this standard to establish appropriate safety, health, and environmental practices and determine the applicability of regulatory limitations prior to use.  
1.5 This international standard was developed in accordance with internationally recognized principles on standardization established in the Decision on Principles for the Development of International Standards, Guides and Recommendations issued by the World Trade Organization Technical Barriers to Trade (TBT) Committee.

General Information

Status
Published
Publication Date
30-Nov-2020
Technical Committee
E42 - Surface Analysis
Drafting Committee
E42.06 - SIMS

Relations

Effective Date
01-Dec-2003
Effective Date
10-Dec-2002
Effective Date
10-Nov-2001
Effective Date
10-Nov-2001

Overview

ASTM E1881-12(2020) - Standard Guide for Cell Culture Analysis with SIMS provides guidance for the preparation and analysis of in vitro cell cultures using Secondary Ion Mass Spectrometry (SIMS). This standard, developed by ASTM International, outlines a cryogenic freeze-fracture sample preparation method that enables SIMS analysis of individual cells in their native state. Covering both frozen-hydrated and frozen-freeze-dried samples, the guide also describes complementary optical, laser scanning confocal, and secondary electron microscopy techniques. By ensuring cells are maintained close to their physiological conditions during analysis, ASTM E1881 enables accurate chemical and molecular mapping within single cells.

Key Topics

  • Cryogenic Freeze-Fracture Preparation:
    The standard details a sandwich freeze-fracture approach that preserves cellular structure and composition by fast freezing and fracturing cell cultures grown on conductive substrates like silicon or germanium.

  • Avoidance of Chemical Alteration:
    Unlike conventional washing methods that may expose cells to unphysiological reagents, this method minimizes chemical changes and maintains sample integrity for high-fidelity SIMS imaging.

  • Correlative Microscopy Procedures:
    Guidance is provided for correlating data from SIMS with optical, laser scanning confocal, and secondary electron microscopies, enabling enhanced localization of chemical elements and molecular species within organelles and cellular compartments.

  • Sample Types and Limitations:
    Applicable to a range of adherent cell cultures, both frozen-hydrated and freeze-dried, but not suitable for non-adherent cultures or plastic-embedded specimens.

Applications

ASTM E1881-12(2020) is widely used across research and industry settings where precise cell culture analysis at the molecular and atomic level is required. Practical applications include:

  • Elemental and Ion Transport Imaging:
    Mapping sodium, potassium, calcium, and other ions within individual cells to study physiological processes such as transport and signaling.

  • Drug Localization Studies:
    Determining the distribution of therapeutic drugs and isotopically labeled molecules within single cells, supporting pharmaceutical research and toxicology.

  • Health and Disease Analysis:
    Comparing chemical alterations in cells under different health conditions or disease models, facilitating biomedical research and diagnostics.

  • Quantitative Ion Imaging:
    Enabling quantification of ion concentrations and distributions, vital for understanding cellular responses and metabolic processes.

  • Correlative Studies:
    Integrating SIMS data with confocal microscopy allows simultaneous analysis of both the elemental/molecular and structural aspects of cells.

Related Standards

  • ASTM E673 (Withdrawn): Terminology Relating to Surface Analysis, referenced for definitions within the context of SIMS.
  • Other Microscopy and Mass Spectrometry Standards:
    Standards relating to surface analysis, sample preparation, and associated analytical techniques for biological materials complement the guidance in ASTM E1881.

Researchers and laboratory professionals implementing cell culture analysis with SIMS benefit from ASTM E1881-12(2020)’s proven methodologies to achieve reproducible, high-resolution chemical imaging, supporting advanced studies in cell biology, pharmacology, and materials science.

Keywords: cell culture analysis, SIMS, cryogenic sample preparation, freeze-fracture method, in vitro analysis, elemental imaging, drug localization, correlative microscopy, ASTM E1881.

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Frequently Asked Questions

ASTM E1881-12(2020) is a guide published by ASTM International. Its full title is "Standard Guide for Cell Culture Analysis with SIMS". This standard covers: SIGNIFICANCE AND USE 5.1 The presence of cell growth medium complicates a direct analysis of cells with SIMS. Attempts to wash out the nutrient medium results in the exposure of cells to unphysiological reagents that may also alter their chemical composition. This obstacle is overcome by using a sandwich freeze-fracture method (1). This cryogenic method has provided a unique way of sampling individual cells in their native state for SIMS analysis. 5.2 The procedure described here has been successfully used for imaging Na+ and K+ ion transport (3), calcium alterations in stimulated cells (4,5), and localization of therapeutic drugs and isotopically labeled molecules in single cells (6). The frozen freeze-dried cells prepared according to this method have been checked for SIMS matrix effects (7). Ion image quantification has also been achieved in this sample type (8). 5.3 The procedure described here is amenable to a wide variety of cell cultures and provides a way for studying the response of individual cells for chemical alterations in the state of health and disease and localization of isotopically-labeled molecules and theraputic drugs in cell culture models. SCOPE 1.1 This guide provides the Secondary Ion Mass Spectrometry (SIMS) analyst with a cryogenic method for analyzing individual tissue culture cells growing in vitro. This guide is suitable for frozen-hydrated and frozen-freeze-dried sample types. Included are procedures for correlating optical, laser scanning confocal and secondary electron microscopies to complement SIMS analysis. 1.2 This guide is not suitable for cell cultures that do not attach to the substrate. 1.3 This guide is not suitable for any plastic embedded cell culture specimens. 1.4 This standard does not purport to address all of the safety concerns, if any, associated with its use. It is the responsibility of the user of this standard to establish appropriate safety, health, and environmental practices and determine the applicability of regulatory limitations prior to use. 1.5 This international standard was developed in accordance with internationally recognized principles on standardization established in the Decision on Principles for the Development of International Standards, Guides and Recommendations issued by the World Trade Organization Technical Barriers to Trade (TBT) Committee.

SIGNIFICANCE AND USE 5.1 The presence of cell growth medium complicates a direct analysis of cells with SIMS. Attempts to wash out the nutrient medium results in the exposure of cells to unphysiological reagents that may also alter their chemical composition. This obstacle is overcome by using a sandwich freeze-fracture method (1). This cryogenic method has provided a unique way of sampling individual cells in their native state for SIMS analysis. 5.2 The procedure described here has been successfully used for imaging Na+ and K+ ion transport (3), calcium alterations in stimulated cells (4,5), and localization of therapeutic drugs and isotopically labeled molecules in single cells (6). The frozen freeze-dried cells prepared according to this method have been checked for SIMS matrix effects (7). Ion image quantification has also been achieved in this sample type (8). 5.3 The procedure described here is amenable to a wide variety of cell cultures and provides a way for studying the response of individual cells for chemical alterations in the state of health and disease and localization of isotopically-labeled molecules and theraputic drugs in cell culture models. SCOPE 1.1 This guide provides the Secondary Ion Mass Spectrometry (SIMS) analyst with a cryogenic method for analyzing individual tissue culture cells growing in vitro. This guide is suitable for frozen-hydrated and frozen-freeze-dried sample types. Included are procedures for correlating optical, laser scanning confocal and secondary electron microscopies to complement SIMS analysis. 1.2 This guide is not suitable for cell cultures that do not attach to the substrate. 1.3 This guide is not suitable for any plastic embedded cell culture specimens. 1.4 This standard does not purport to address all of the safety concerns, if any, associated with its use. It is the responsibility of the user of this standard to establish appropriate safety, health, and environmental practices and determine the applicability of regulatory limitations prior to use. 1.5 This international standard was developed in accordance with internationally recognized principles on standardization established in the Decision on Principles for the Development of International Standards, Guides and Recommendations issued by the World Trade Organization Technical Barriers to Trade (TBT) Committee.

ASTM E1881-12(2020) is classified under the following ICS (International Classification for Standards) categories: 07.100.10 - Medical microbiology. The ICS classification helps identify the subject area and facilitates finding related standards.

ASTM E1881-12(2020) has the following relationships with other standards: It is inter standard links to ASTM E673-03, ASTM E673-02a, ASTM E673-01, ASTM E673-98E1. Understanding these relationships helps ensure you are using the most current and applicable version of the standard.

ASTM E1881-12(2020) is available in PDF format for immediate download after purchase. The document can be added to your cart and obtained through the secure checkout process. Digital delivery ensures instant access to the complete standard document.

Standards Content (Sample)


This international standard was developed in accordance with internationally recognized principles on standardization established in the Decision on Principles for the
Development of International Standards, Guides and Recommendations issued by the World Trade Organization Technical Barriers to Trade (TBT) Committee.
Designation: E1881 − 12 (Reapproved 2020)
Standard Guide for
Cell Culture Analysis with SIMS
This standard is issued under the fixed designation E1881; the number immediately following the designation indicates the year of
original adoption or, in the case of revision, the year of last revision. A number in parentheses indicates the year of last reapproval. A
superscript epsilon (´) indicates an editorial change since the last revision or reapproval.
1. Scope 4. Summary of Guide
1.1 This guide provides the Secondary Ion Mass Spectrom-
4.1 This guide describes a cryogenic freeze-fracture method
etry (SIMS) analyst with a cryogenic method for analyzing
of sample preparation for cell culture specimens for SIMS
individual tissue culture cells growing in vitro. This guide is
analysis. In brief, cell cultures are grown on a conducting
suitable for frozen-hydrated and frozen-freeze-dried sample
substrate, such as silicon. When cells reach about 80 %
types. Included are procedures for correlating optical, laser
confluency, they are fast frozen and fractured by using a
scanning confocal and secondary electron microscopies to
sandwich method (1). This allows freeze-fixation of cellular
complement SIMS analysis.
contents and removal of the EF-leaflet of the apical plasma
membrane. Since this kind of fracture occurs in groups of cells
1.2 This guide is not suitable for cell cultures that do not
attach to the substrate. growing together, fractured cells are easily recognized for
optical, SEM and SIMS imaging.
1.3 This guide is not suitable for any plastic embedded cell
culture specimens.
4.2 By correlative laser scanning confocal microscopy and
SIMS, the same frozen freeze-dried cell can be analyzed for
1.4 This standard does not purport to address all of the
safety concerns, if any, associated with its use. It is the organelle localization in relation to elemental content (2).
responsibility of the user of this standard to establish appro-
priate safety, health, and environmental practices and deter- 5. Significance and Use
mine the applicability of regulatory limitations prior to use.
5.1 The presence of cell growth medium complicates a
1.5 This international standard was developed in accor-
direct analysis of cells with SIMS. Attempts to wash out the
dance with internationally recognized principles on standard-
nutrient medium results in the exposure of cells to unphysi-
ization established in the Decision on Principles for the
ological reagents that may also alter their chemical composi-
Development of International Standards, Guides and Recom-
tion. This obstacle is overcome by using a sandwich freeze-
mendations issued by the World Trade Organization Technical
fracture method (1). This cryogenic method has provided a
Barriers to Trade (TBT) Committee.
uniquewayofsamplingindividualcellsintheirnativestatefor
2. Referenced Documents
SIMS analysis.
2.1 ASTM Standards:
5.2 The procedure described here has been successfully
+ +
E673 Terminology Relating to SurfaceAnalysis (Withdrawn
used for imaging Na and K ion transport (3), calcium
2012)
alterations in stimulated cells (4,5), and localization of thera-
peutic drugs and isotopically labeled molecules in single cells
3. Terminology
(6). The frozen freeze-dried cells prepared according to this
3.1 Definitions:
method have been checked for SIMS matrix effects (7). Ion
3.1.1 SeeTerminology E673 for definitions of terms used in
imagequantificationhasalsobeenachievedinthissampletype
SIMS.
(8).
5.3 The procedure described here is amenable to a wide
This guide is under the jurisdiction of ASTM Committee E42 on Surface
variety of cell cultures and provides a way for studying the
Analysis and is the direct responsibility of Subcommittee E42.06 on SIMS.
Current edition approved Dec. 1, 2020. Published December 2020. Originally
response of individual cells for chemical alterations in the state
approved in 1997. Last previous edition approved in 2012 as E1881 – 12. DOI:
of health and disease and localization of isotopically-labeled
10.1520/E1881-12R20.
molecules and theraputic drugs in cell culture models.
For referenced ASTM standards, visit the ASTM website, www.astm.org, or
contact ASTM Customer Service at service@astm.org. For Annual Book of ASTM
Standards volume information, refer to the standard’s Document Summary page on
the ASTM website.
The last approved version of this historical standard is referenced on The boldface numbers in parentheses refer to a list of references at the end of
www.astm.org. this guide.
Copyright © ASTM International, 100 Barr Harbor Drive, PO Box C700, West Conshohocken, PA 19428-2959. United States
E1881 − 12 (2020)
6. Apparatus or dorsal cells surfaces, and randomly scattered individual
cross fractured cells where the fracture plane has passed
6.1 This guide can be used for the analysis of cell cultures
through the cytoplasm and/or nucleus (10). In a group of cells
with virtually any SIMS instrument.
fractured at the dorsal cell surface the apical plasma membrane
6.2 A cold stage in the SIMS instrument is needed to
fracture removes the extracellular nutrient medium and the
analyze frozen-hydrated specimens (9).
EF-leaflet of the plasma membrane on the top silicon piece (1,
10).Thefracturedcellsonthesiliconsubstratecanbeanalyzed
7. Procedure
frozen-hydrated or after freeze-drying with SIMS imaging
7.1 Cells are grown on silicon wafer pieces (approximately
techniques.
1cm area) of any shape.Alternatively, high purity germanium
7.1.2 Depending on the need of a particular SIMS analysis,
wafer pieces are used for cell growth for studies involving the
the freeze-dried cells may be analyzed directly or gold coated
use of Ca stable isotope. These substrates are nontoxic to
to enhance electrical conductivity.
cells and have been used for growing various cell lines (1,2,8).
7.1.3 For correlative optical, SEM and SIMS, fractured
Sterilize the silicon or germanium pieces prior to cell seeding.
freeze-dried cells can be imaged with a reflected light micro-
After the cells reach about 80 % confluency, replace the
scope or SEM prior to SIMS analysis (11).
nutrient growth medium with new medium containing 11 µm
7.1.4 For organelle localization in relation to SIMS isotope
polystyrene beads (approximately 50 000 beads per 100 mm
images, a correlative laser scanning confocal microscopy and
plastic dish, see Ref (1) for details on size of the beads). These
SIMS approach has been developed (2). This approach relies
beads act as spacers during the sandwich-fracture technique. It
on labeling the organelles with specific fluorescent markers in
takes approximately 30 min for the beads to settle down on the
live cells and then mapping the organelle localization in 3-D
substrate.After beads settle down on the substrate the cells can
with a laser scanning confocal microscope in a fractured
...

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